Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921142.1_cds_XP_016470161.1_62642
CDS Infomation

[gene=LOC107792463] [db_xref=GeneID:107792463] [protein=DEAD-box ATP-dependent RNA helicase 24-like] [protein_id=XP_016470161.1] [location=complement(join(44935..44986,45106..45505,45727..45766,46747..47975,49152..49764))] [gbkey=CDS]
Sequence

ATGTCGAAGAGAAAATTCGGATTCGAAGGATTTGGAATAAATAAGCAAACGACGTACAAC
TTCGAGCGAAATCAAGCTCCTCAGCGACTGTACGTCCCGCCGTCGTCACGCTCCGGCGGT
AGCCACGACAATTACGAAGACACCGACTTAGATAACATCGAGTACGAAGAACACGATGCC
GTCGGAGAGGACAACAAAAACGTTGGTGGAGGAGGAGGCGGCGGCGCCGAAGATGATGAG
ATTGATCCGCTCGATGCGTTTATGGAAGGGATTCATGAGGAAATGAAGGCGGCGCCGCCT
CCGAAGCCGAAGGAGAAGCTTGATAAGTATAAGGATGATGTAGAGGATGATCCGATGGAG
AGTTTTTTGAGAGCGAAGAAGGATGTAGGGTTACAATTGGCTGCTGAAGCTCTTAACGCT
GGTTATAATTCGGACGAGGAGGTTTATGCTGCGGCGAAGGCTGTTGATGCAGGATTGGTT
GAGTATGACTCGGATGATAATCCTATTGTTGTTGATAAAAAGAAGATCGAACCTATTCCT
GCTTTGGAACATAGTGAGATAGACTATGAGGCTTTCAACAAGGACTTTTACGAGGAAAAG
CCTTCTATTTCAGGTATGAGCGATCCGGAAGTTAATGAATATAGGTCAAGCTTGGCAATT
CGTGTATCAGGCTTTGATGTTCCAAGGCCTGTTAAGACATTTGAAAACTGTGGTTTTTCT
GGTGAGTTGATGAAAGCTATCAGTAAACAGGGATATGAAAAGCCCACACCAATACAGTGT
CAAGCATTGCCGATTGTGCTCTCTGGGAGAGATATTATTGGTATTGCTAAAACTGGGTCT
GGCAAGACTGCTGCTTTTGTGCTTCCTATGATTGTCCACATTATGGATCAGCCTGAACTT
CAGAAAGAAGAAGGTCCCATTGGAGTTATTTGTGCACCTACTAGGGAATTAGCACATCAA
ATATTTGTGGAGGCAAAAAAATTCTCTAAATCGCATGGTATCCGTGTCTCTGCAGTTTAT
GGAGGAATGTCTAAGTTGGATCAATACAAAGAACTAAAGGCAGGATGTGAGATTGTTGTT
GCTACTCCAGGGAGGTTGATAGATATGCTTAGAAAGAAGGCATTTACAATGTTGAGGGCA
ACTTACCTAGTACTAGATGAGGCTGATCGGATGTTTGACCTTGGTTTTGAGCCTCAGATA
AGGTCCATTGTCGGTCAAATTAGACCTGATCGTCAAACATTGCTCTTTTCAGCAACTATG
CCCCGCAAAGTTGAAAAGCTTGCCAGAGAAATATTGACAGATCCTGTAAGAGTTACCGTG
GGTGAGATTGGCATGGCTAATGAGGATATTACACAATTAGTTCAAGTGATTCCTTCAGAT
GCTGAAAAATTGCCTTGGCTTTTGGAAAAGCTCCCTGTACTGATCGACAATGGTGACGTT
CTTGTCTTCGCTTCGAAAAAGGCAACAGTGGATGAGATTGAATCTCAACTGGCTCAGAAG
GGATTTAGAGTTGCAGCTCTCCATGGTGACAAGGATCAAGTTTCTCGTATGGAGACGCTG
CAAAAGTTTAAATCTGGCATATATCATGTTCTTATCGCAACTGATGTTGCTGCCCGTGGT
CTTGACATCAAATCAATTAAGTCAGTGGTGAACTATGACATAGCTAAAGACATGGACATG
CATGTTCACAGAATTGGGAGAACAGGTCGTGCTGGTGACAAAGATGGGACGGCCTACACT
CTTATTACACAGAAGGAAGCGCGTTTTGCTGGTGAACTGGCTAACAGTTTGGTTGCTGCC
GGTCAAACTGTGTCCATCGAACTAATGGACCTTGCTATGAAGGATGGGAGGTTCCGGTCC
AAAAGGGATGCAAGGAAAGGAGGTGGAAAAAGGGCCAAAGGAAGGGGAGGAGGAAACAAT
AGAGGTGTACGAGGTGTGGATTTTGGTCTAGGTATTGGATACAATGCTGAATCAAATAAC
CCTCCCCAGAACGCTGCTCCAAGCCGTTCTGCAGCAGTTAATTCCCTGAGGACAGGCATG
ATGGCACAATTTAAAAGTAACTTTGTTGCTGCATCGTCAAATTCTCAAAATCAAGGGATG
AATAACACAGCTGGTGCATATCCGAACAAGGGAATGGTCTTACAAGGCTTTGTCTCTGGT
GGGACAATAGGTGGAGAAAGTAATGCTTCCCGTATTAGTTCCACATTTGCTGCTGCTACA
CCTGGTGCATATTCTTCTAGTCAGCCAGCTAGAGATGGAGCAAACCAGAAGAGTTCAGAG
AGTTCAAAAGAGAAGTCTAGAGAAAGACGGAGGCCTTCTGGTTGGGATCGTTGA

Peptide Sequence

PEP ID

XP_016470161.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Nicotiana tabacum]
Sequence

MSKRKFGFEGFGINKQTTYNFERNQAPQRLYVPPSSRSGGSHDNYEDTDLDNIEYEEHDA
VGEDNKNVGGGGGGGAEDDEIDPLDAFMEGIHEEMKAAPPPKPKEKLDKYKDDVEDDPME
SFLRAKKDVGLQLAAEALNAGYNSDEEVYAAAKAVDAGLVEYDSDDNPIVVDKKKIEPIP
ALEHSEIDYEAFNKDFYEEKPSISGMSDPEVNEYRSSLAIRVSGFDVPRPVKTFENCGFS
GELMKAISKQGYEKPTPIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPEL
QKEEGPIGVICAPTRELAHQIFVEAKKFSKSHGIRVSAVYGGMSKLDQYKELKAGCEIVV
ATPGRLIDMLRKKAFTMLRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATM
PRKVEKLAREILTDPVRVTVGEIGMANEDITQLVQVIPSDAEKLPWLLEKLPVLIDNGDV
LVFASKKATVDEIESQLAQKGFRVAALHGDKDQVSRMETLQKFKSGIYHVLIATDVAARG
LDIKSIKSVVNYDIAKDMDMHVHRIGRTGRAGDKDGTAYTLITQKEARFAGELANSLVAA
GQTVSIELMDLAMKDGRFRSKRDARKGGGKRAKGRGGGNNRGVRGVDFGLGIGYNAESNN
PPQNAAPSRSAAVNSLRTGMMAQFKSNFVAASSNSQNQGMNNTAGAYPNKGMVLQGFVSG
GTIGGESNASRISSTFAAATPGAYSSSQPARDGANQKSSESSKEKSRERRRPSGWDR

Transcript Sequence

Gene sequence data has not been registered.